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Resources

Learn, Apply, Discover

Whether you're just getting started or going deep, explore how our approach can help you grow your research with confidence.

Scientific Validation

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We're not a black box.

Scientists ask hard questions about how Tesorai generates more identifications. We think that's exactly right. These explainers answer them directly — written for scientists, with the data to back it up.

Tesorai

July 22, 2026

Education

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What is Proteomics? A guide to Mass Spectrometry, Search Engines, and Data Acquisition

From how proteins are measured to why the software that analyzes the data matters as mush as the instrument that generates it.

Tesorai

July 22, 2026

FDR, Match-Between-Runs, and Immunopeptidomics: A Plain-Language Guide

Three concepts that determine whether you can trust your proteomics results — and what to look for when evaluating any search engine.

Case Studies

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Revealing the Functional Landscape of RNA Editing

How UCSF researchers used deep proteomics and AI-enabled peptide identification to map 7.998 protien-verified RNA editing sites - an 18-fold increase over previously reported evidence.

Tesorai

July 21, 2026

Publications

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Enhanced protein identification and quantification improve differential expression analysis

Accurate protein identification and quantification are central to extracting meaningful biological insights from mass spectrometry (MS)-based proteomics.

Tesorai

A pan-cancer atlas of therapeutic T cell targets

Our collaborators at NYU have deposited a preprint on bioRxiv describing the use of Tesorai for identifying cancer antigens that could be used for therapeutic targeting.

Tesorai

July 8, 2025

The Publication Bottleneck: Lossy compression in the Age of Omics

Valuable biological information is lost in the practice of publishing our work.

Charlie Kim

June 10, 2026

Differential proteomics: Unpacking the protein table

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Max Burq

April 15, 2024

Learning the grass, not the cow: How overfitting can mislead proteomics searches

Tools like Percolator can boost sensitivity, but overfitting can cause models to mistake artifacts for real signals, leading to more false positives.

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Max Burq

March 12, 2024

Development of a large pretrained model for Tesorai Search

Peter's lecture at MaxQuant Summer School 2024 describing the principles underlying how Search was built.

Tesorai

October 12, 2024

Building Tesorai - an interview with Peter

Tanja Janko with the ASEF spoke with Peter about the creation of Tesorai and the future of molecular analysis.

Tesorai

July 11, 2024

Learning Hub

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Demo video

See Tesorai Chat in action and watch examples of how it can make data visualization faster and easier.

Get started

Learn how to set up your first analysis with Tesorai Search. This guide walks you through uploading your data, running a search, and reviewing the results.

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Peter Cimermancic

July 23, 2025