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Developing and Benchmarking Agentic LLM Frameworks for Accelerated and Accessible Proteomics Data Analysis
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Publications
Tesorai Search: Cloud-based Database Search Engine Boosts Identifications for Mass Spectrometry Proteomics With a Pretrained Peptide-spectrum Deep-learning Model
Tesorai Search is now peer-reviewed and published in the Journal of Molecular Biology, detailing the model's design and benchmarking against other leading proteomics search engines.

Publications
Rapid Mechanistic Bridging of an Alzheimer's Disease Plasma Protein Staging Panel Across Brain Proteomics Cohorts
Five public brain proteomics cohorts, reprocessed on Tesorai, support a seven-protein blood panel for Alzheimer's staging, including recovered p-tau217. Presented at HUPO 2026.

Publications
Integrating Narrow-Window DIA with AI-Powered Search Enables Deep and Reliable Functional Proteomics
Our collaborators at MD Anderson Cancer Center have deposited a preprint on bioRxiv benchmarking narrow-window DIA with Tesorai Search, achieving the deepest proteome coverage among 12 acquisition-analysis pipelines tested while maintaining rigorous FDR control.